Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908902.1_cds_XP_016459127.1_52685
CDS Infomation

[gene=LOC107782712] [db_xref=GeneID:107782712] [protein=chromo domain protein LHP1-like isoform X2] [protein_id=XP_016459127.1] [location=join(44644..44892,45022..45047,45172..45258,45389..46117,49641..49701,50133..50180)] [gbkey=CDS]
Sequence

ATGAAAGGAGGGAAACAGAACTCCGATGCCGTCGCCGGCGACAATGGTGTCAGTCGTGAG
CAGCCATCCAACGGTGCCGCACAAGCTGAGCAGCAAAAAAGAGATGGGAATGCTGGCGAA
GAGGATGAAGATGTGGGAAAGGAGTATGAAGAGAAAATCGAAGAAGAGGAATTAGCTGAT
GCGGAAAAACCAAAGCTTGCTGAAGGGTTTTATGAGATTGAGGATGTATGGAGAAAGAGG
GTTCGAAAGGGCAAAGTTCAGTATCTAATCAAATGGCGAGGCTGGCCGGAGAGTGCAAAC
ACATGGGAACCTGTGGAGAATCTAATGACGTGCTATGATGTTATTGATGCATTTGAAGAG
AGCTTGCGGTCAGGGAAACAACGATTGGCACGTAAGCGTAAGCGGCAGCATGGGGTTACT
CACACTCAAATCAAAAGAAAGCAGCAGCAGTGTTCCCCTGCAGCTGCTACATATGATGTG
CCTGCAGTGAAGGTTAGCATAATGGAGGAACCTATGCCTTCATCTCCTCTGGCTAGCTTG
GATGCTATTAATCATGTGGATAGTAGTGGTAGTGGTTTGAATGATATCCAAGTGGACGGA
GTGGCGAACGGCAATGATTTGAATTTCGATTCCTCTATAAAAGAAATTAATGAGAAAAAT
GAATTGGATTTAAAGCTTAGTGAATTAAAGGGAGGGATAGCAACAAAAGAGACATCTGCG
GATACATCTGGTGATGGCCTTACAAGTGGATTTTCAGCAGCCAATGGAACAGAATCACTT
CAATCTGGTCGCTGTACCGGAGCTAAAAGGAGGAAGCCTACTTCTGTTCGGAGGTTTAAA
CCGGAAACTGCCTCAGGTGTAATGAATGATTCCCAAGATGCTGTAGCAAATGCTACTAGT
GGCCCTTTTGTTGCATTCACGCAGGAAGGAATTCACGATCATGGATTTGTGGGCAATGCT
TTAGGTTGCAAAAATAAGTGGGATGATTCCAAAGATGCGTGTGCCATAGCAGAAATTATA
AAGCCTATGAGCTATTCGGCATCTGTATCGAGTGATTTTCAGGATGTGTTCGTGACCTTT
TTAGCTAAGAGGTCTGATGGAAAGGAAGTTATGGTGGATAACAAGTTTCTAAAGATGAAT
AATCCACTTGTGTTGATAAACTTTTATGAGCAAAATCTTCGATATCATCCCACACAATGA

Peptide Sequence

PEP ID

XP_016459127.1
PEP Infomation

PREDICTED: chromo domain protein LHP1-like isoform X2 [Nicotiana tabacum]
Sequence

MKGGKQNSDAVAGDNGVSREQPSNGAAQAEQQKRDGNAGEEDEDVGKEYEEKIEEEELAD
AEKPKLAEGFYEIEDVWRKRVRKGKVQYLIKWRGWPESANTWEPVENLMTCYDVIDAFEE
SLRSGKQRLARKRKRQHGVTHTQIKRKQQQCSPAAATYDVPAVKVSIMEEPMPSSPLASL
DAINHVDSSGSGLNDIQVDGVANGNDLNFDSSIKEINEKNELDLKLSELKGGIATKETSA
DTSGDGLTSGFSAANGTESLQSGRCTGAKRRKPTSVRRFKPETASGVMNDSQDAVANATS
GPFVAFTQEGIHDHGFVGNALGCKNKWDDSKDACAIAEIIKPMSYSASVSSDFQDVFVTF
LAKRSDGKEVMVDNKFLKMNNPLVLINFYEQNLRYHPTQ

Transcript Sequence

Gene sequence data has not been registered.